Philippe Roumagnac : rechercher sur Z-Library

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1

Illuminating an Ecological Blackbox: Using High Throughput Sequencing to Characterize the Plant Virome Across Scales

Maclot, FranÃ§ois, Candresse, Thierry, Filloux, Denis, Malmstrom, Carolyn M., Roumagnac, Philippe, van der Vlugt, RenÃ©, Massart, SÃ©bastien

Journal:

Frontiers in Microbiology

Année:

2020

Fichier:

PDF, 2.58 MB

2020

2

An African origin for the intimate association between humans and Helicobacter pylori

Linz, Bodo, Balloux, François, Moodley, Yoshan, Manica, Andrea, Liu, Hua, Roumagnac, Philippe, Falush, Daniel, Stamer, Christiana, Prugnolle, Franck, van der Merwe, Schalk W.

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 744 KB

english, 2007

3

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

Morelli, Giovanna, Song, Yajun, Mazzoni, Camila J, Eppinger, Mark, Roumagnac, Philippe, Wagner, David M, Feldkamp, Mirjam, Kusecek, Barica, Vogler, Amy J, Li, Yanjun

Journal:

Nature Genetics

Année:

2010

Langue:

english

Fichier:

PDF, 407 KB

english, 2010

4

Two novel Alphaflexiviridae members revealed by deep sequencing of the Vanilla (Orchidaceae) virome

Grisoni, Michel, Marais, Armelle, Filloux, Denis, Saison, Anne, Faure, Chantal, Julian, Charlotte, Theil, Sébastien, Contreras, Sandy, Teycheney, Pierre-Yves, Roumagnac, Philippe, Candresse, Thierry

Journal:

Archives of Virology

Année:

2017

Langue:

english

Fichier:

PDF, 682 KB

english, 2017

5

First report of Alfalfa leaf curl virus affecting alfalfa (Medicago sativa L.) in Jordan, Lebanon, Syria and Tunisia

Kumari, Safaa G., Moukahel, Abdul Rahman, Richet, Cecile, Galzi, Serge, Filloux, Denis, ROUMAGNAC, Philippe, Asaad, Nader, Hijazi, Jomana, Mghandef, Samia

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 124 KB

english, 2018

6

Recombination in Eukaryotic Single Stranded DNA Viruses

Martin, Darren P., Biagini, Philippe, Lefeuvre, Pierre, Golden, Michael, Roumagnac, Philippe, Varsani, Arvind

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 3.74 MB

english, 2011

7

A New Prevalent Densovirus Discovered in Acari. Insight from Metagenomics in Viral Communities Associated with Two-Spotted Mite (Tetranychus urticae) Populations

François, Sarah, Mutuel, Doriane, Duncan, Alison, Rodrigues, Leonor, Danzelle, Celya, Lefevre, Sophie, Santos, Inês, Frayssinet, Marie, Fernandez, Emmanuel, Filloux, Denis, Roumagnac, Philippe, Froiss

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 3.86 MB

english, 2019

8

Evolution and ecology of plant viruses

Lefeuvre, Pierre, Martin, Darren P., Elena, Santiago F., Shepherd, Dionne N., Roumagnac, Philippe, Varsani, Arvind

Journal:

Nature Reviews Microbiology

Année:

2019

Langue:

english

Fichier:

PDF, 2.48 MB

english, 2019

9

Improvements in Virus Detection at CIRADâs Sugarcane Quarantine Using Both Viral Metagenomics and PCR-Based Approaches

Fernandez, Emmanuel, Ferdinand, Romain, Filloux, Denis, Guinet, Isabelle, Julian, Charlotte, Rott, Philippe, Roumagnac, Philippe, Daugrois, Jean-Heinrich

Journal:

Année:

2020

Fichier:

PDF, 584 KB

2020

10

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

Holt, Kathryn E, Parkhill, Julian, Mazzoni, Camila J, Roumagnac, Philippe, Weill, François-Xavier, Goodhead, Ian, Rance, Richard, Baker, Stephen, Maskell, Duncan J, Wain, John

Journal:

Nature Genetics

Année:

2008

Langue:

english

Fichier:

PDF, 332 KB

english, 2008

11

Reversible oxygen-tolerant hydrogenase carried by free-living N2-fixing bacteria isolated from the rhizospheres of rice, maize, and wheat

Philippe Roumagnac, Pierre Richaud, Mohamed Barakat, Philippe Ortet, Marie-Anne Roncato, Thierry Heulin, Gilles Peltier, Wafa Achouak, Laurent Cournac

Journal:

MicrobiologyOpen

Année:

2012

Langue:

english

Fichier:

PDF, 2.01 MB

english, 2012

12

The genome of African yam ( Dioscorea cayenensis-rotundata complex) hosts endogenous sequences from four distinct badnavirus species

Umber, Marie, Filloux, Denis, Muller, Emmanuelle, Laboureau, Nathalie, Galzi, Serge, Roumagnac, Philippe, Iskra-Caruana, Marie-Line, Pavis, Claudie, Teycheney, Pierre-Yves, Seal, Susan E.

Journal:

Molecular Plant Pathology

Année:

2014

Langue:

english

Fichier:

PDF, 487 KB

english, 2014

13

Identification of novelBromus- andTrifolium-associated circular DNA viruses

Kraberger, Simona, Farkas, Kata, Bernardo, Pauline, Booker, Cameron, Argüello-Astorga, Gerardo R., Mesléard, François, Martin, Darren P., Roumagnac, Philippe, Varsani, Arvind

Journal:

Archives of Virology

Année:

2015

Langue:

english

Fichier:

PDF, 486 KB

english, 2015

14

Plant Virus Metagenomics: Advances in Virus Discovery

Roossinck, Marilyn J., Martin, Darren P., Roumagnac, Philippe

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 703 KB

english, 2015

15

Alfalfa leaf curl virus: An aphid-transmitted geminivirus

Roumagnac, Philippe, Granier, Martine, Bernardo, Pauline, Deshoux, Maëlle, Ferdinand, Romain, Galzi, Serge, Fernandez, Emmanuel, Julian, Charlotte, Abt, Isabelle, Filloux, Denis, Mesléard, François, V

Journal:

Journal of Virology

Année:

2015

Langue:

english

Fichier:

PDF, 1.77 MB

english, 2015

16

Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar

Vogler, Amy J., Chan, Fabien, Wagner, David M., Roumagnac, Philippe, Lee, Judy, Nera, Roxanne, Eppinger, Mark, Ravel, Jacques, Rahalison, Lila, Rasoamanana, Bruno W., Beckstrom-Sternberg, Stephen M.,

Journal:

PLoS Neglected Tropical Diseases

Année:

2011

Langue:

english

Fichier:

PDF, 1016 KB

english, 2011

17

Salmonella enterica Serotype Typhi with Nonclassical Quinolone Resistance Phenotype

Accou-Demartin, Marie, Gaborieau, Valérie, Song, Yajun, Roumagnac, Philippe, Marchou, Bruno, Achtman, Mark, Weill, François-Xavier

Journal:

Emerging Infectious Diseases

Année:

2011

Langue:

english

Fichier:

PDF, 377 KB

english, 2011

18

Biogeographical distribution of Rimicaris exoculata resident gut epibiont communities along the Mid-Atlantic Ridge hydrothermal vent sites

Durand, Lucile, Roumagnac, Marie, Cueff-Gauchard, Valérie, Jan, Cyrielle, Guri, Mathieu, Tessier, Claire, Haond, Marine, Crassous, Philippe, Zbinden, Magali, Arnaud-Haond, Sophie, Cambon-Bonavita, Mar

Journal:

FEMS Microbiology Ecology

Année:

2015

Langue:

english

Fichier:

PDF, 594 KB

english, 2015

19

Cancer genetic consultation and anxiety in healthy consultees

Julian-reynier, Claire, Eisinger, François, Chabal, Françoise, Aurran, Yvette, Bignon, Yves-Jean, Machelard-roumagnac, Martine, Maugard, Christine, Noguès, Catherine, Vennin, Philippe, Sobol, Hagay

Journal:

Psychology and Health

Année:

1999

Langue:

english

Fichier:

PDF, 962 KB

english, 1999

20

Diverse circular replication-associated protein encoding viruses circulating in invertebrates within a lake ecosystem

Dayaram, Anisha, Galatowitsch, Mark L., Argüello-Astorga, Gerardo R., van Bysterveldt, Katherine, Kraberger, Simona, Stainton, Daisy, Harding, Jon S., Roumagnac, Philippe, Martin, Darren P., Lefeuvre,

Journal:

Infection, Genetics and Evolution

Année:

2016

Langue:

english

Fichier:

PDF, 5.17 MB

english, 2016

21

[Society of Petroleum Engineers Abu Dhabi International Conference and Exhibition - Abu Dhabi, United Arab Emirates (2004-10-10)] Abu Dhabi International Conference and Exhibition - Correlation of the Upper Dalan/Kangan Formation between offshore Iran and the Zagros: Impact of lateral changes in facies and diagenesis on reservoir quality

Insalaco, Enzo, Lescanne, Marc, Masse, Pierre, Walgenwitz, Frederic, Sudrie, Marina, Thiry-Bastien, Philippe, Roumagnac, Alain, Fraisse, Christian, Kamali, Mohammad, Moallemi, Ali, Lotfpour, Masoud, M

Langue:

english

Fichier:

PDF, 49 KB

english

22

Prevalence of Sugarcane yellow leaf virus in Sugarcane-Producing Regions in Kenya Revealed by Reverse-Transcription Loop-Mediated Isothermal Amplification Method

Amata, Ruth L., Fernandez, Emmanuel, Filloux, Denis, Martin, Darren P., Rott, Philippe, Roumagnac, Philippe

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2016

23

CapulavirusandGrablovirus: two new genera in the familyGeminiviridae

Varsani, Arvind, Roumagnac, Philippe, Fuchs, Marc, Navas-Castillo, Jesús, Moriones, Enrique, Idris, Ali, Briddon, Rob W., Rivera-Bustamante, Rafael, Murilo Zerbini, F., Martin, Darren P

Journal:

Archives of Virology

Année:

2017

Langue:

english

Fichier:

PDF, 893 KB

english, 2017

24

Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso

Palanga, Essowè, Martin, Darren P., Galzi, Serge, Zabré, Jean, Bouda, Zakaria, Neya, James Bouma, Sawadogo, Mahamadou, Traore, Oumar, Peterschmitt, Michel, Roumagnac, Philippe, Filloux, Denis

Journal:

Archives of Virology

Année:

2017

Langue:

english

Fichier:

PDF, 409 KB

english, 2017

25

Genome sequences of a capulavirus infectingPlantago lanceolatain the Åland archipelago of Finland

Susi, Hanna, Laine, Anna-Liisa, Filloux, Denis, Kraberger, Simona, Farkas, Kata, Bernardo, Pauline, Frilander, Mikko J., Martin, Darren P., Varsani, Arvind, Roumagnac, Philippe

Journal:

Archives of Virology

Année:

2017

Langue:

english

Fichier:

PDF, 456 KB

english, 2017

26

Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France

Gallet, Romain, Kraberger, Simona, Filloux, Denis, Galzi, Serge, Fontes, Hugo, Martin, Darren P., Varsani, Arvind, Roumagnac, Philippe

Journal:

Archives of Virology

Année:

2017

Langue:

english

Fichier:

PDF, 1.82 MB

english, 2017

27

Comparison of loop-mediated isothermal amplification, polymerase chain reaction, and selective isolation assays for detection of Xanthomonas albilineans from sugarcane

Duarte Dias, Vanessa, Fernandez, Emmanuel, Cunha, Marcos G., Pieretti, Isabelle, Hincapie, Martha, Roumagnac, Philippe, Comstock, Jack C., Rott, Philippe

Journal:

Tropical Plant Pathology

Année:

2018

Langue:

english

Fichier:

PDF, 541 KB

english, 2018

28

Alphasatellitidae: a new family with two subfamilies for the classification of geminivirus- and nanovirus-associated alphasatellites

Briddon, Rob W., Martin, Darren P., Roumagnac, Philippe, Navas-Castillo, Jesús, Fiallo-Olivé, Elvira, Moriones, Enrique, Lett, Jean-Michel, Zerbini, F. Murilo, Varsani, Arvind

Journal:

Archives of Virology

Année:

2018

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2018

29

Viral metagenomic-based screening of sugarcane from Florida reveals occurrence of six sugarcane-infecting viruses and high prevalence of Sugarcane yellow leaf virus

Filloux, Denis, FERNANDEZ, Emmanuel, Comstock, Jack C, Mollov, Dimitre, ROUMAGNAC, Philippe, Rott, Philippe C.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 3.35 MB

english, 2018

30

Métagénomique virale et pathologie

Bernardo, Pauline, Albina, Emmanuel, Eloit, Marc, Roumagnac, Philippe

Journal:

médecine/sciences

Année:

2013

Langue:

french

Fichier:

PDF, 2.85 MB

french, 2013

31

First report of Alfalfa leaf curl virus from alfalfa in Iran

Davoodi, Zohreh, Heydarnejade, Jahangir, Massumi, Hossein, Richet, Cecile, Galzi, Serge, Filloux, Denis, ROUMAGNAC, Philippe

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 120 KB

english, 2018

32

Novel circular DNA viruses associated with Apiaceae and Poaceae from South Africa and New Zealand

Richet, Cécile, Kraberger, Simona, Filloux, Denis, Bernardo, Pauline, Harkins, Gordon W., Martin, Darren P., Roumagnac, Philippe, Varsani, Arvind

Journal:

Archives of Virology

Année:

2018

Langue:

english

Fichier:

PDF, 791 KB

english, 2018

33

Notes on recombination and reassortment in multipartite/segmented viruses

Varsani, Arvind, Lefeuvre, Pierre, Roumagnac, Philippe, Martin, Darren

Journal:

Current Opinion in Virology

Année:

2018

Langue:

english

Fichier:

PDF, 1.35 MB

english, 2018

34

Nanopore-based detection and characterization of yam viruses

Filloux, Denis, Fernandez, Emmanuel, Loire, Etienne, Claude, Lisa, Galzi, Serge, Candresse, Thierry, Winter, Stephan, Jeeva, M. L., Makeshkumar, T., Martin, Darren P., Roumagnac, Philippe

Journal:

Scientific Reports

Année:

2018

Langue:

english

Fichier:

PDF, 1.40 MB

english, 2018

35

ICTV Virus Taxonomy Profile: Geminiviridae

Zerbini, F. Murilo, Briddon, Rob W, Idris, Ali, Martin, Darren P, Moriones, Enrique, Navas-Castillo, Jesús, Rivera-Bustamante, Rafael, Roumagnac, Philippe, Varsani, Arvind

Journal:

Journal of General Virology

Année:

2017

Langue:

english

Fichier:

PDF, 1.10 MB

english, 2017

36

Diverse and variable virus communities in wild plant populations revealed by metagenomic tools

Susi, Hanna, Filloux, Denis, Frilander, Mikko J., Roumagnac, Philippe, Laine, Anna-Liisa

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 1.61 MB

english, 2019

37

Exploring the diversity of Poaceae-infecting mastreviruses on Reunion Island using a viral metagenomics-based approach

Claverie, Sohini, Ouattara, Alassane, Hoareau, Murielle, Filloux, Denis, Varsani, Arvind, Roumagnac, Philippe, Martin, Darren P., Lett, Jean-Michel, Lefeuvre, Pierre

Journal:

Scientific Reports

Année:

2019

Langue:

english

Fichier:

PDF, 2.36 MB

english, 2019

38

Sorghum mastrevirus-associated alphasatellites: new geminialphasatellites associated with an African streak mastrevirus infecting wild Poaceae plants on Reunion Island

Claverie, Sohini, Varsani, Arvind, Hoareau, Murielle, Filloux, Denis, Roumagnac, Philippe, Martin, Darren P., Lefeuvre, Pierre, Lett, Jean-Michel

Journal:

Archives of Virology

Année:

2020

Fichier:

PDF, 712 KB

2020

39

Yam asymptomatic virus 1, a novel virus infecting yams (Dioscorea spp.) with significant prevalence in a germplasm collection

Marais, Armelle, Umber, Marie, Filloux, Denis, Gomez, Rose-Marie, Faure, Chantal, Pavis, Claudie, Julian, Charlotte, Roumagnac, Philippe, Acina-Mambole, Isabelle, Bonheur, Lydiane, Theil, SÃ©bastien,

Journal:

Archives of Virology

Année:

2020

Fichier:

PDF, 551 KB

2020

40

Diverse genomoviruses representing twenty-nine species identified associated with plants

Fontenele, Rafaela S., Roumagnac, Philippe, Richet, CÃ©cile, Kraberger, Simona, Stainton, Daisy, Aleamotuâa, Maketalena, Filloux, Denis, Bernardo, Pauline, Harkins, Gordon W., McCarthy, James, Charl

Journal:

Archives of Virology

Année:

2020

Fichier:

PDF, 2.00 MB

2020

41

High-Throughput Sequencing for Deciphering the Virome of Alfalfa (Medicago sativa L.)

Bejerman, Nicolas, Roumagnac, Philippe, Nemchinov, Lev G.

Journal:

Frontiers in Microbiology

Année:

2020

Fichier:

PDF, 5.31 MB

2020

42

Large-scale survey reveals pervasiveness and potential function of endogenous geminiviral sequences in plants

Sharma, Vikas, Lefeuvre, Pierre, Roumagnac, Philippe, Filloux, Denis, Teycheney, Pierre-Yves, Martin, Darren P, Maumus, Florian

Journal:

Virus Evolution

Année:

2020

Fichier:

PDF, 4.18 MB

2020